New Study From Alaska Shows Warming Soil Unleashes Metals That are Deadly to Fish and the Food Chain

A new study detailing the severity of contamination in Alaska’s rivers has been published in the Proceedings of the National Academy of Sciences. The study focuses on the Salmon River, and researchers warn that similar transformations are already underway across dozens of other Arctic watersheds. The National Academy of Sciences was established in 1863 by an Act of Congress, signed by President Lincoln, as a private, nongovernmental institution to advise the nation on issues related to science and technology.

According to the study, in Alaska’s Brooks Range, rivers once clear enough to drink now run orange and hazy with toxic metals. As warming thaws formerly frozen ground, it sets off a chemical chain reaction that is poisoning fish and wreaking havoc on ecosystems. As the planet warms, a layer of permafrost—permanently frozen Arctic soil that locked away minerals for millennia—is beginning to thaw. Water and oxygen creep into the newly exposed soil, triggering the breakdown of sulfide-rich rocks, and creating sulfuric acid that leaches naturally occurring metals like iron, cadmium, and aluminum from rocks into the river. 

• Related: [VIDEO] Chris Tomer’s Winter 2025-26 Forecast: Meteorologist Pinpoints Which Resorts Will Win this Winter

The study continues by saying that there are times when mining operations trigger the geochemical reactions like these. However, that is not the case this time.  “This is what acid mine drainage looks like,” Tim Lyons, a biogeochemist at the University of California, Riverside, told the university in a September 2025 article. “But here, there’s no mine. The permafrost is thawing and changing the chemistry of the landscape.”

“I have worked and traveled in the Brooks Range since 1976, and the recent changes in landforms and water chemistry are truly astounding,” David Cooper, Colorado State University research scientist and study co-author, told UC Riverside.

Ecologist Paddy Sullivan of the University of Alaska first noticed the dramatic changes in 2019 while conducting fieldwork on Arctic forests shifting northward—another consequence of climate change. A pilot flying Sullivan into the field warned him the Salmon River hadn’t cleared up after the snowmelt and looked “like sewage.” Alarmed by what he saw, Sullivan joined forces with Lyons, Roman Dial from Alaska Pacific University, and others to investigate the causes and ecological consequences.

Their analysis confirmed that thawing permafrost was unleashing geochemical reactions that oxidize sulfide-rich rocks like pyrite, generating acidity and mobilizing a wide suite of metals, including cadmium. This causes accumulation in fish organs and could affect animals like bears and birds that eat fish. In small amounts, metals aren’t necessarily toxic. However, the study shows that levels of metals in the river’s waters exceed U.S. Environmental Protection Agency toxicity thresholds for aquatic life. In addition, the iron-clouded waters reduce the amount of light reaching the bottom of the river and smother insect larvae eaten by the salmon and other fish.

While current metal concentrations in edible fish tissue are not considered hazardous to humans, the changes to the rivers pose indirect but serious threats. Chum salmon, a key subsistence species for many Indigenous communities, might struggle to spawn in gravel beds choked with fine sediment. Other species, such as grayling and Dolly Varden, may also be affected.

“It’s not just a Salmon River story,” Lyons told Riverside. “This is happening across the Arctic. Wherever you have the right kind of rock and thawing permafrost, this process can start.” Unlike mine sites, where acid drainage can be mitigated with buffers or containment systems, these remote watersheds might have hundreds of contamination sources and no such infrastructure. Once the chemical process begins, the only thing that can stop it is the recovery of the permafrost. “There’s no fixing this once it starts,” Lyons said. “It’s another irreversible shift driven by a warming planet.”

The study, funded by the National Science Foundation’s Rapid Response program, highlights the potential danger for other Arctic regions. The researchers would like to help communities and land managers anticipate future impacts and, when possible, prepare for them. “There are few places left on Earth as untouched as these rivers,” Lyons said. “But even here, far from cities and highways, the fingerprint of global warming is unmistakable. No place is spared.”

The findings of the study indicate that habitat quality for resident and anadromous fish has been severely degraded in the Salmon River watershed. Loss of crucial spawning habitat in the Salmon and many other streams in the region might help explain a recent crash in chum salmon returns, which local communities depend upon for commercial and subsistence harvest.

For locals, this is not good news because the salmon they depend on for food and the fishing industry are in jeopardy because the rivers are getting toxic and murky, killing off salmon. For Alaska, this could spread to more rivers, disrupting fishing and harming the natural environment. Globally, it’s a sign that climate change is wrecking even the most remote places, harming wildlife, ecosystems, and human communities everywhere.